Re: [Rd] R-2.0.1 and Rggobi

From: A.J. Rossini <blindglobe_at_gmail.com>
Date: Wed 24 Nov 2004 - 17:14:10 EST

Brian is correct regarding the lists, but note that Rggobi 1.1 works for me (Duncan T-L sent me the following link which worked for me on an old R-H or SuSE system (sorry Dirk! not had a chance to change it yet...).

" Try the tar file at

    http://www.ggobi.org/Download/Rggobi_1.1-0.tar.gz "

best,
-tony

On Wed, 24 Nov 2004 05:50:46 +0000 (GMT), Prof Brian Ripley <ripley@stats.ox.ac.uk> wrote:
> Please note that is not the correct fix. From the ONEWS in 2.0.1:
>
> o The undocumented C-level entry point R_IsNaNorNA has been
> removed. It was used in a couple of packages, and should be
> replaced by a call to the documented macro ISNAN.
>
> The ggobi list are now operational again (or at least they have had a
> burst of activity), and that would be the appropriate place to pursue
> this.
>
>
>
> On Wed, 24 Nov 2004, Richard Beare wrote:
>
> > Hi,
> >
> > Thanks for that - I attempted to install the earlier versions I had been
> > successful with before - Rggobi 1.0.0 and ggobi 1.0.0-beta. The R side of
> > things wouldn't compile out of the box due to a change in the R_IsNaNorNA
> > function. This caused a problem in RSGgobi.c, which I fixed by adding the
> > following patch:
> >
> > static int G_IsNaNorNA(double f)
> > {
> > return (R_IsNaN(f) || R_IsNA(f));
> > }
> >
> > and changed
> > GGobi_setMissingValueIdentifier(R_IsNaNorNA);
> > to
> > GGobi_setMissingValueIdentifier(G_IsNaNorNA);
> >
> > I can at least load the package and start ggobi now.
> >
> > Thanks
> >
> > Dirk Eddelbuettel wrote:
> >> Richard,
> >>
> >> On Wed, Nov 24, 2004 at 01:54:36PM +1100, Richard Beare wrote:
> >>
> >>> Hi,
> >>> I've had no luck with the combination of R-2.0.1 and Rggobi/gobi (1.1-1
> >>> and 1.0-1 beta). I've tried a default configuration of ggobi, as well as
> >>> one with all the plugins enabled. I'm using RedHat 9 Linux.
> >>>
> >>> The problem I'm experiencing is a segmentation fault when library.dynam is
> >>> called from .First.lib
> >>>
> >>> ggobi appears to work OK from the command line. I had an earlier
> >>> combination working under R-1.8.1
> >>>
> >>> Does anyone have fixes/suggestions?
> >>
> >>
> >> It still works for me as this cut&pasted session log from ESS shows:
> >>
> >> R : Copyright 2004, The R Foundation for Statistical Computing
> >> Version 2.0.1 (2004-11-15), ISBN 3-900051-07-0
> >> R is free software and comes with ABSOLUTELY NO WARRANTY.
> >> You are welcome to redistribute it under certain conditions.
> >> Type 'license()' or 'licence()' for distribution details.
> >> R is a collaborative project with many contributors.
> >> Type 'contributors()' for more information and
> >> 'citation()' on how to cite R or R packages in publications.
> >> Type 'demo()' for some demos, 'help()' for on-line help, or
> >> 'help.start()' for a HTML browser interface to help.
> >> Type 'q()' to quit R.
> >> > options(STERM='iESS', editor='gnuclient -q')
> >> > library(Rggobi)
> >> > ggobi()
> >> [1] "ggobi reference (1)"
> >> > ## and the ggobi gtk console comes up
> >>
> >> but I'd also be the first to tell you that I (as the maintainer of these
> >> Debian packages) kept the versions frozen as I had difficulties building
> >> the
> >> newer ggobi and/or Rggobi versions (and possible combinations, been a while
> >> I since I tried last):
> >>
> >> edd@basebud:~> COLUMNS=120 dpkg -l "*ggobi*" | cut -c -80
> >> Desired=Unknown/Install/Remove/Purge/Hold
> >> | Status=Not/Installed/Config-files/Unpacked/Failed-config/Half-installed
> >> |/ Err?=(none)/Hold/Reinst-required/X=both-problems (Status,Err:
> >> uppercase=bad)
> >> ||/ Name Version Description
> >> +++-========================-========================-========================
> >> ii ggobi 0.99.10-3 Data visualization
> >> syste
> >> ii r-omegahat-ggobi 0.53.0-4 GNU R package for the
> >> GG
> >>
> >> Sources for these are on any Debian mirror and possibly also still on
> >> ggobi.org. Can't recall if we needed patches; if so they also be on the
> >> Debian mirrors.
> >>
> >> Hope this helps, Dirk
> >>
> >
> >
> > --
> > Richard Beare, CSIRO Mathematical & Information Sciences
> > Locked Bag 17, North Ryde, NSW 1670, Australia
> > Phone: +61-2-93253221 (GMT+~10hrs) Fax: +61-2-93253200
> >
> > Richard.Beare@csiro.au
> >
> > ______________________________________________
> > R-devel@stat.math.ethz.ch mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-devel
> >
> >
>
> --
> Brian D. Ripley, ripley@stats.ox.ac.uk
> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
> University of Oxford, Tel: +44 1865 272861 (self)
> 1 South Parks Road, +44 1865 272866 (PA)
> Oxford OX1 3TG, UK Fax: +44 1865 272595
>
>
>
> ______________________________________________
> R-devel@stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>

-- 

best,
-tony

---
A.J. Rossini
blindglobe@gmail.com

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Received on Wed Nov 24 17:29:34 2004

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