[Rd] Install R-patched_2006-07-13 on i386-pc-solaris2.10 with Sun Studio 11

From: Latchezar Dimitrov <ldimitro_at_wfubmc.edu>
Date: Wed 26 Jul 2006 - 05:33:14 GMT


Dear R-developers:

I'm trying to build a 64-bit R-patched_2006-07-24 on SunFire V40z with on Solaris OS 10 64-bit kernel and using Sun Studio 11 compilers. Everything runs OK until it gets to building package tools (all.R) where it fails. Bellow is how I tried it (I can provide any other additional info if needed). Any help please?

Thank you very much

Latchezar Dimitrov
Wake Forest Univ. School of Medicine

root@Huba # echo $PATH
/opt/SUNWspro/bin:/usr/sbin:/usr/bin:/usr/openwin/bin:/usr/ccs/bin:/usr/ openwin/bin:/usr/dt/bin:/usr/platform/i86pc/sbin:/opt/SUNWvts/bin:/opt/S UNWexplo/bin:/usr/local/bin
root@Huba # echo $CC
cc
root@Huba # echo $CXX
CC
root@Huba # echo $CFLAGS
-xarch=amd64 -xmodel=medium

root@Huba # echo $CXXFLAGS
-xarch=amd64 -xmodel=medium

root@Huba # echo $FCFLAGS
-xarch=amd64 -xmodel=medium

root@Huba # echo $FFLAGS
-xarch=amd64 -xmodel=medium

root@Huba # echo $LDFLAGS
-xarch=amd64 -xmodel=medium

root@Huba # echo $R_BROWSER
/usr/sfw/bin/mozilla
root@Huba # echo $r_arch
amd64
root@Huba # echo $LD_LIBRARY_PATH
/usr/openwin/lib:/usr/local/gcc-4.1.1-x86-bootstrap/lib/gcc/i386-pc-sola ris2.10/4.1.1/amd64:/usr/local/lib:/usr/local/gcc-4.1.1-x86-bootstrap/li b/gcc/i386-pc-solaris2.10/4.1.1/amd64:/usr/local/lib:/usr/local/gcc-4.1. 1-x86-bootstrap/lib/gcc/i386-pc-solaris2.10/4.1.1/amd64:/usr/local/lib root@Huba #

../src/R-patched_2006-07-24/configure
--prefix=/opt/R-2.3.1-patched_2006-07-24-Sun_Studio_11 --with-readline
--disable-mbcs R_PAPERSIZE=letter --disable-rpath --with-bzlib
--with-zlib --with-spcre --with-tcltk --disable-R-profiling
--disable-nls

Error in parseNamespaceFile(package, package.lib, mustExist = FALSE) :

        subscript out of bounds
Execution halted
*** Error code 1
The following command caused the error:
(cat
../../../../src/R-patched_2006-07-24/src/library/tools/R/makeLazyLoad.R;
\
  echo "makeLazyLoading(\"tools\")") | \   R_DEFAULT_PACKAGES=NULL LC_COLLATE=C ../../../bin/R --vanilla --slave > /dev/null
dmake: Fatal error: Command failed for target `all' Current working directory /export/data/obj-R/src/library/tools *** Error code 1
The following command caused the error:
for pkg in profile base tools utils grDevices graphics stats datasets methods grid splines stats4 tcltk; do \
  (cd ${pkg} && dmake) || exit 1; \
done
dmake: Fatal error: Command failed for target `R' Current working directory /export/data/obj-R/src/library *** Error code 1
The following command caused the error:
for d in scripts include extra appl nmath unix main modules library; do \
  (cd ${d} && dmake R) || exit 1; \
done
dmake: Fatal error: Command failed for target `R' Current working directory /export/data/obj-R/src *** Error code 1
The following command caused the error:
for d in m4 tools doc etc share src tests; do \   (cd ${d} && dmake R) || exit 1; \
done
dmake: Fatal error: Command failed for target `R' root@Huba #



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