Re: [Rd] broken save(..., compress="xy")

From: Hervé Pagès <hpages_at_fhcrc.org>
Date: Fri, 23 Sep 2011 11:44:32 -0700

On 11-09-23 11:02 AM, Sarah Goslee wrote:
> Hi,
>
>
> 2011/9/23 Hervé Pagès<hpages_at_fhcrc.org>:
>> Hi,
>>
>> With current R devel and R 2.13.1:
>>
>>> aa=1:5
>>> save(aa, file="aa.rda", compress="xy")
>> Error in identical(compress, "gzip") || compress :
>> invalid 'y' type in 'x || y'
>
> The options for compress are "gzip" "bzip2" or "xz" (and not "xy"), at
> least on my linux system. Are you sure you want "xy"?

Right, I wanted "xz", sorry... Maybe error handling could be improved though so a typo in the input doesn't "break" the code?

Thanks,
H.

>
> Sarah
>
>> Thanks!
>> H.
>>
>>> sessionInfo()
>> R version 2.13.1 (2011-07-08)
>> Platform: x86_64-unknown-linux-gnu (64-bit)
>>
>> locale:
>> [1] LC_CTYPE=en_CA.UTF-8 LC_NUMERIC=C
>> [3] LC_TIME=en_CA.UTF-8 LC_COLLATE=en_CA.UTF-8
>> [5] LC_MONETARY=C LC_MESSAGES=en_CA.UTF-8
>> [7] LC_PAPER=en_CA.UTF-8 LC_NAME=C
>> [9] LC_ADDRESS=C LC_TELEPHONE=C
>> [11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C
>>
>> attached base packages:
>> [1] stats graphics grDevices utils datasets methods base
>>
>>
>> --
>
>

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages_at_fhcrc.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319

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