Re: [Rd] (PR#11281) Bug in R 2.7 for over long lines (crasher+proposed fix!)

From: Roger Bivand <Roger.Bivand_at_nhh.no>
Date: Tue, 13 May 2008 10:25:09 +0200 (CEST)

On Tue, 13 May 2008, maechler_at_stat.math.ethz.ch wrote:

>>>>>> "BDR" == Prof Brian Ripley <ripley@stats.ox.ac.uk>
>>>>>> on Tue, 13 May 2008 07:32:43 +0100 (BST) writes:
>
> BDR> This example does not crash in R 2.7.0, R-patched nor
> BDR> R-devel (r45677) for me (x86_64 F8 Linux.) It also
> BDR> does not crash with the CRAN build of R 2.7.0 on
> BDR> Windows XP.
>
> Neither does it for me in R 2.7.0
> on two x86_64 Linux platforms:
> Ubuntu 8.04 and Redhat Enterprise 5.1

For the record, it does crash release 2.7.0 on a fully updated RHEL 5 ix86, on fully updated F7 ix86 (gdb "memory corruption"); on RHEL 4 ix86 gdb says: "double free or corruption" and points at

#0  0x003bc7a2 in _dl_sysinfo_int80 () from /lib/ld-linux.so.2
#1  0x00baa815 in raise () from /lib/tls/libc.so.6
#2  0x00bac279 in abort () from /lib/tls/libc.so.6
#3  0x00bdecca in __libc_message () from /lib/tls/libc.so.6
#4  0x00be555f in _int_free () from /lib/tls/libc.so.6
#5  0x00be593a in free () from /lib/tls/libc.so.6
#6  0x08169131 in Rf_yyparse () at gram.c:3041
#7  0x08169284 in R_Parse1 (status=0x0) at gram.c:3326
#8  0x08169362 in R_Parse (n=-1, status=0xbfffe9d8, srcfile=0x8b33820)
     at gram.c:3447

This is of course only of historical interest, since 2.8.0 (2008-05-13 r45678) on RHEL 4 completes source("Features.R") repeatedly with no apparent difficulty. So it was a 32-bit problem on some Linux systems.

Roger

>
> Martin
>
> BDR> On Tue, 13 May 2008, Soeren Sonnenburg wrote:
>
> >> On Mon, 2008-05-12 at 11:10 +0200,
> >> maechler_at_stat.math.ethz.ch wrote:
> >>> Hi Soeren,
> >>>>>>>> "SS" == Soeren Sonnenburg <bugreports_at_nn7.de> on
> >>>>>>>> Sat, 10 May 2008 05:32:14 +0000 writes:
> >>>
> SS> On Sat, 2008-04-26 at 09:38 +0200, Peter Dalgaard wrote:
> >>> >> bugreports_at_nn7.de wrote: > OK, I am just sending it
> >>> here >> too as it looks like r-devel_at_r-project.org > is
> >>> not the >> right place:
> >>> >>>
> >>> >> I think it was seen there too, just that noone got
> >>> around >> to reply. In R-bugs, there's a filing system
> >>> so that it >> won't be completely forgotten...
> >>>
> SS> Looks like no one cares about this :(
> >>>
> >>> Just "looks like" but it aint...
> >>>
> SS> What should I do now? I mean I pointed directly to the
> SS> bug and did show how it could be fixed....
> >>>
> >>> I'm not among the parse experts within R-core, but I
> >>> think the main problem with your report is that you talk
> >>> about a crash but do not provide "self-contained
> >>> reproducible" code to produce such a crash, but just the
> >>> assertion that you get crashes when working on R <->
> >>> Swig interaction. Can you construct simple R code
> >>> producing the crash?
> >>
> >> No. I put however difficult autogenerated (~800k big!) .R
> >> code that will crash R 2.7 at
> >> http://nn7.de/debugging/Features.R for everyone to enjoy
> >> :)
> >>
> >> Sourcing it will crash R2.7.0 (without my fix) but not
> >> 2.8.
> >>
> >> Soeren
> >>
> >> ______________________________________________
> >> R-devel_at_r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-devel
> >>
>
>

-- 
Roger Bivand
Economic Geography Section, Department of Economics, Norwegian School of
Economics and Business Administration, Helleveien 30, N-5045 Bergen,
Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43
e-mail: Roger.Bivand_at_nhh.no

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