[Rd] Build R-2.10.0 on HP-UX ia64 server

From: 亿元五角 <dna_jin_at_hotmail.com>
Date: Mon, 18 Jan 2010 18:13:16 +0800

Hi All,

I want to build R-2.10.0 on HP-UX, but I got following error message:

ld: Unsatisfied symbol "zgemm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "zgemv" in file CHOLMOD.a[cholmod_l_super_solve.o]
ld: Unsatisfied symbol "zherk" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "ztrsm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "ztrsv" in file CHOLMOD.a[cholmod_l_super_solve.o]
ld: Unsatisfied symbol "dgemm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "dgemv" in file CHOLMOD.a[cholmod_l_super_solve.o]
ld: Unsatisfied symbol "main" in file <no file>
ld: Unsatisfied symbol "alloca" in file CHMfactor.o
ld: Unsatisfied symbol "dpotrf" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "zpotrf" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "dsyrk" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "dtrsm" in file CHOLMOD.a[cholmod_l_super_numeric.o]
ld: Unsatisfied symbol "dtrsv" in file CHOLMOD.a[cholmod_l_super_solve.o]
14 errors.
gmake[3]: *** [Matrix.sl] Error 1
gmake[3]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended/Matrix/src' ERROR: compilation failed for package 'Matrix' * removing '/rnd/homes/jixu/tmp/R-2.10.1/library/Matrix'
gmake[2]: *** [Matrix.ts] Error 1
gmake[2]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended'
gmake[1]: *** [recommended-packages] Error 2
gmake[1]: Leaving directory `/rnd/homes/jixu/tmp/R-2.10.1/src/library/Recommended'
gmake: *** [stamp-recommended] Error 2

Any help or suggestions would be appreciated.

In addition I use below parameter:

export CC="cc"
export CFLAGS="-AC99 +DD64"
export CXX="aCC"
export CXXFLAGS="-b +DD64"
export F77="f90"
export FFLAGS="+DD64"
export LDFLAGS="-L/opt/fortran90/lib -L/usr/lib/hpux64"

./configure --prefix=$/usr/homes/myrhome --enable-R-shlib --with-x --with-readline=no  

In addition to the R-2.10.1 still can reproduce this issue with above parameter.

Thanks in advance,

Xu Jin                                                


        [[alternative HTML version deleted]]



R-devel_at_r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel Received on Mon 18 Jan 2010 - 10:20:28 GMT

Archive maintained by Robert King, hosted by the discipline of statistics at the University of Newcastle, Australia.
Archive generated by hypermail 2.2.0, at Mon 18 Jan 2010 - 13:10:15 GMT.

Mailing list information is available at https://stat.ethz.ch/mailman/listinfo/r-devel. Please read the posting guide before posting to the list.

list of date sections of archive