Re: [Rd] two-way communication using Unix pipes

From: Paul Roebuck <roebuck_at_mdanderson.org>
Date: Wed 16 Nov 2005 - 19:52:00 GMT

On Wed, 16 Nov 2005, Jonathan Callahan wrote:

> I am trying to communicate with R from a perl program. Because this code
> must be deployed on systems that are outside of my control I do not wish to
> pursue the RSperl.pm approach which requires that R be compiled to use
> shared libraries.
>
> I have a custom, light weight module I have used with other command line
> driven programs like Ferret and Grads. This module follows the standard perl
> procedures for forking a process, opening pipes and then redirecting STDOUT,
> STDIN and STDERR. Commands are sent out to the external program and my perl
> module then uses perl's select(2) function to listen for output from the
> program.
>
> Unfortunately, it doesn't ever seem to get a response from R on the
> redirected STDOUT or STDERR.
>
> Looking at the perl IPC::Run module I see that some programs are aware of
> whether they are talking to a tty or not and revert to 'batch behavior' if
> they don't detect a tty.
>
> Can someone please explain to me exactly what R is doing with the the
> standard IO handles and whether or not there is any simple way to convince
> it to behave as if it were talking to a user at the other end of a keyboard
> and terminal? I've already tried '--no-readline' but that doesn't solve my
> problem.

You can always run a pseudoterminal (pty) between them which will solve your problem. You can get a copy of the source for a simple one from Steven's APUE. May have to modify the getopt() processing a bit on Linux.



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