Re: [R] rtree() distances between tips as n by n matrix?

From: Brian Pellerin <brianpatrickpellerin_at_gmail.com>
Date: Tue, 29 Mar 2011 08:12:56 -0300

Thanks, Simon. This is very useful.

Brian

On Mon, Mar 28, 2011 at 11:39 PM, Simon Blomberg <s.blomberg1_at_uq.edu.au>wrote:

> ?cophenetic
>
> Cheers,
>
> Simon.
>
> On 29/03/11 10:27, Ben Bolker wrote:
>
>> Brian Pellerin<brianpatrickpellerin<at> gmail.com> writes:
>>
>>
>>
>>
>>> If I generate a random tree with n=10 tips as rtree(n=10) say, is there a
>>> way to have the distances between all tips put into a n by n matrix?
>>>
>>>
>>>
>> You should probably send this to the r-sig-phylo (phylogenetics)
>> special interest group mailing list rather than the general R help
>> list; most of the people here have no idea that you're talking about
>> the random tree generating function from the ape package ...
>>
>> Ben Bolker
>>
>> ______________________________________________
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>> PLEASE do read the posting guide
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>>
>>
>
>
> --
> Simon Blomberg, BSc (Hons), PhD, MAppStat, AStat
> Lecturer and Consultant Statistician
> School of Biological Sciences
> The University of Queensland
> St. Lucia Queensland 4072
> Australia
> T: +61 7 3365 2506
> email: S.Blomberg1_at_uq.edu.au
> http://www.uq.edu.au/~uqsblomb/
>
> Policies:
> 1. I will NOT analyse your data for you.
> 2. Your deadline is your problem
>
> Statistics is the grammar of science - Karl Pearson.
>
>

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