Re: [R] filled contour plot with contour lines

From: Clint Bowman <clint_at_ecy.wa.gov>
Date: Fri, 01 Apr 2011 14:47:49 -0700 (PDT)

Steve,

I use filled.contour but have a semicolon, ";", between the two axis calls. Do you need one after

"axis(1, seq(450000 , 580000, by = 10000))"

?

Clint

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On Fri, 1 Apr 2011, Steve_Friedman_at_nps.gov wrote:


> Hi Peter,
>
> Thanks for taking the time to consider the problem. I realize the procedure
> is not reproducible. I use a 4 dimensional netCDF file (4.2 GB) in size to
> pull data into this process. Nobody in their right mind should work with
> such things. It's a spatial temporal database with 10 years of daily data
> in a irregular area spanning 405 x 287 cells.
>
> Anyway, I tried your suggestion adding a { in front of the for loop and a
> closing } following the last line.
>
> It did not work.
>
>

> Steve Friedman Ph. D.
> Ecologist / Spatial Statistical Analyst
> Everglades and Dry Tortugas National Park
> 950 N Krome Ave (3rd Floor)
> Homestead, Florida 33034
>
> Steve_Friedman_at_nps.gov
> Office (305) 224 - 4282
> Fax (305) 224 - 4147
>
>
>
> Peter Ehlers
> <ehlers_at_ucalgary.
> ca> To
> "Steve_Friedman_at_nps.gov"
> 04/01/2011 05:08 <Steve_Friedman_at_nps.gov>
> PM cc
> "r-help_at_r-project.org"
> <r-help_at_r-project.org>
> Subject
> Re: [R] filled contour plot with
> contour lines
>
>
>
>
>
>
>
>
>
>
> Aren't you missing a set of parentheses?
> I can't run your code since it's not reproducible, but to
> my aging eyes it seems that you need a set of '{}' around
> the contents of your loop:
>
> for(j in 1:(varsize[4]-1)) { loop stuff }
>
> Peter Ehlers
>
> On 2011-04-01 11:48, Steve_Friedman_at_nps.gov wrote:
>>
>> I'm stumped, can anyone find my error in this sequence.
>>
>> for(j in 1:(varsize[4]-1))
>> temp<- get.var.ncdf(nc=input,
>> varid="p_foraging",c(1,1,j),c(varsize[1],varsize[2],1))
>> filled.contour(x, y, temp, color = terrain.colors,
>> plot.title = title(main = paste("Everglades Wood Stork
>> Foraging Potential \nYear", (2000+j)),
>> xlab = "UTM East", ylab = "UTM North") ,
>> plot.axes = { contour(temp, add=T)
>> axis(1, seq(450000 , 580000, by = 10000))
>> axis(2, seq(2800000,4000000, by = 10000)) },
>> key.title = title(main="Probability") ,
>> key.axes = axis(4, seq(0 , 1 , by = 0.1))
>>
>>
>> The routine will work in a modified form without adding the coordinates
>> (the axis lines) but when I include these the routine produces various
>> errors, such as "dimension mismatch", or "unexpected end encountered."
>>
>> I tried to follow the example on filled.contour help page.
>>
>> Thanks in advance
>> Steve
>>
>> Steve Friedman Ph. D.
>> Ecologist / Spatial Statistical Analyst
>> Everglades and Dry Tortugas National Park
>> 950 N Krome Ave (3rd Floor)
>> Homestead, Florida 33034
>>
>> Steve_Friedman_at_nps.gov
>> Office (305) 224 - 4282
>> Fax (305) 224 - 4147
>>
>> ______________________________________________
>> R-help_at_r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>
> ______________________________________________
> R-help_at_r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
______________________________________________ R-help_at_r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Received on Fri 01 Apr 2011 - 22:07:53 GMT

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