Re: [R] JGR on SUSE 10.1 AMD 64

From: Rainer Volz <mail_at_vrtprj.com>
Date: Sun 10 Sep 2006 - 08:56:51 GMT

Tomas Willebrand <tomas.willebrand <at> szooek.slu.se> writes:

>
> Dear list;
>
> I have R Version 2.3.1 (2006-06-01) installed on a AMD 64 machine with SUSE
> 10.1.
>
> I have Sun Java version 1.5.0-sun installed.
>
> I have used "install.packages("JGR", dep=TRUE) to install rJava, iplots and
> JGR. I would like to do a presentation of linux and R for the department!
>
> Compiling rJava do not give any error messages!
>
> But when trying to load library("JGR") or just library("rJava") I get the
> following error message:
> > Error in dyn.load(x, as.logical(local), as.logical(now)) :
> > unable to load shared library '/usr/lib64/R/library/rJava/libs/rJava.so':
> > libjvm.so: kan inte öppna delad objektfil: Filen eller katalogen finns inte
> > Error in library("rJava") : .First.lib failed for 'rJava'
>
I have the same configuration: adding various library paths for the missing libs before calling R made the installation succeed:

export
LD_LIBRARY_PATH=/usr/lib64/R/lib:
/usr/lib64/jvm/java-1.5.0-sun-1.5.0_07/jre/lib/amd64/server: /usr/lib64/jvm/java-1.5.0-sun-1.5.0_07/jre/lib/amd64: $LD_LIBRARY_PATH     HTH
Rainer



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