[R] installing Rgraphviz under fedora 5

From: marco.R.help marco.R.help <marco.r.help_at_gmail.com>
Date: Wed, 13 Jun 2007 13:38:57 +0200


Dear list,

 I have a lot of troubles installing Rgraphviz. I installed graphviz 2.13 from "graphviz-2.13.20061222.0540.tar" I installed the library Rgraphviz

> getBioC("Rgraphviz")

Running biocinstall version 2.0.8 with R version 2.5.0 Your version of R requires version 2.0 of Bioconductor. trying URL '
http://bioconductor.org/packages/2.0/bioc/src/contrib/Rgraphviz_1.14.0.tar.gz '
Content type 'application/x-gzip' length 1522949 bytes

etc etc....

but when I do: library(Rgraphviz)

> library(Rgraphviz)

Error in dyn.load(x, as.logical(local), as.logical(now)) :

        unable to load shared library '/home/jke/mazu/SOFTWARE_INST/R-2.5.0 /library/Rgraphviz/libs/Rgraphviz.so':
  libgvc.so.3: cannot open shared object file: No such file or directory Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz' Error: package/namespace load failed for 'Rgraphviz'

The path to Rgraphviz.so is correct !

Can someone help with this?

this is the session info ....

regards

Marco

> sessioninfo()

Error: could not find function "sessioninfo"
> sessionInfo()

R version 2.5.0 (2007-04-23)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C

attached base packages:
[1] "tools" "stats" "graphics" "grDevices" "datasets" "utils" [7] "methods" "base"

other attached packages:
geneplotter lattice annotate Biobase graph

   "1.14.0" "0.15-4" "1.14.1" "1.14.0" "1.14.2"

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