[R] Flushing (Reset) 'last.warning'

From: Tiago R Magalhães <tiago17_at_gmail.com>
Date: Thu, 13 Dec 2007 11:28:54 +0000


Dear members of the mailing list,

I want to fetch warnings() from a series of prop.test calls. I want to get "none" if no warning is issued, and "warning" if there is a problem.

I have looked (and relooked) at options(warn) and warning(), warnings() and 'last.warning' but to no avail. I am a biologist, so the "R language areas" are hard to fully understand.

I cannot flush the warnings before each prop.test calls; hence if there is no warning, instead of "" I get (obviously) the last.warning from the previous call. I tried to remove 'last.warning' but it won't let me (wisely…) touch the base environment.

Code below. And if anyone could give some pointers it would be great.

Thank you, kind list
###############
collect <- vector('character', 3)
vec.1 <- c(10,19); total.1 <- c(24,35)
vec.2 <- c(5,12); total.2 <- c(50,211)

prop.test(vec.1, total.1); collect[1] <- names(warnings())
prop.test(vec.2, total.2); collect[2] <- names(warnings())
prop.test(vec.1, total.1); collect[3] <- names(warnings())

collect
[1] ""
[2] "Chi-squared approximation may be incorrect"
[3] "Chi-squared approximation may be incorrect"

I wanted
[1] ""
[2] "Chi-squared approximation may be incorrect"
[3] ""



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