[R] error with RSQLite

From: Paul Hammer <paul.hammer_at_tfh-wildau.de>
Date: Fri, 29 Feb 2008 15:47:48 +0100

hi members,

i try to load the package genefilter but i get always this error message:

_R code:_
>library(genefilter)

Error in dyn.load(file, ...) :
  unable to load shared library
'/usr/local/lib64/R/library/RSQLite/libs/RSQLite.so':   /usr/local/lib64/R/library/RSQLite/libs/RSQLite.so: undefined symbol: sqlite3_column_text
Error: package/namespace load failed for 'genefilter'
>library(RSQLite)

Error in dyn.load(file, ...) :
  unable to load shared library
'/usr/local/lib64/R/library/RSQLite/libs/RSQLite.so':   /usr/local/lib64/R/library/RSQLite/libs/RSQLite.so: undefined symbol: sqlite3_column_text
Error: package/namespace load failed for 'RSQLite'


the file RSQLite.so exists and has all rights. i use fedora 7 with 64 bit technology.

any suggestions?

thanks
paul

> sessionInfo()

R version 2.6.2 (2008-02-08)
x86_64-unknown-linux-gnu

locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C

attached base packages:
[1] splines tools stats graphics grDevices utils datasets [8] methods base

other attached packages:
[1] survival_2.34 Biobase_1.16.3 DBI_0.2-4

loaded via a namespace (and not attached): [1] rcompgen_0.1-17

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