[R] Table for clustering dendrogram

From: yvo <yvo.fabian_at_gmx.de>
Date: Wed, 19 Mar 2008 03:56:26 -0700 (PDT)

Dear all,
I am using the hclust method in R. I am building nice dendrograms with it. Actually for my further analysis I want to get the number of bifurcations (bif) for each object (labels) in the dendrogram. That has to be calculated by the colums merge, height and order.

http://www.nabble.com/file/p16142989/Sc2Mown_Pred.txt Sc2Mown_Pred.txt  

Sc2Mpred<- read.table("Sc2Mown_Pred.txt", header=T, row.names=1) library(vegan)
Sc2Mpred_JD <- vegdist(Sc2Mpred, method="jaccard", binary=T, diag=FALSE, upper=FALSE, na.rm = FALSE)
hc2<- hclust(Sc2Mpred_JD, "ave")
plot(hc2, hang = -1)

Do you know of any function that computes that? I did not find any. I hope you have a good advice! Thanks a lot in advance!!  


Yvonne Fabian
PhD Student
University of Fribourg
Department of Biology
Ecology and Evolution Group

http://www.nabble.com/file/p16142989/Sc2Mown_Pred.txt Sc2Mown_Pred.txt

View this message in context: http://www.nabble.com/Table-for-clustering-dendrogram-tp16142989p16142989.html
Sent from the R help mailing list archive at Nabble.com.

R-help_at_r-project.org mailing list
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Received on Wed 19 Mar 2008 - 12:26:40 GMT

Archive maintained by Robert King, hosted by the discipline of statistics at the University of Newcastle, Australia.
Archive generated by hypermail 2.2.0, at Wed 19 Mar 2008 - 12:30:23 GMT.

Mailing list information is available at https://stat.ethz.ch/mailman/listinfo/r-help. Please read the posting guide before posting to the list.

list of date sections of archive