Re: [R] "Levels" error after printing

From: Dieter Menne <dieter.menne_at_menne-biomed.de>
Date: Thu, 29 May 2008 15:15:42 +0000 (UTC)

Gundala Viswanath <gundalav <at> gmail.com> writes:

>
> Hi all,
>
> After running this code (attaches is the input file):
>
> dat <- read.table("gene_prob.txt", sep = "\t")
> n <- length(dat$V1)
> print(n)
> print(dat$V1)
>
> I get this print out.
>
> ......
> [8541] LOC552889 GPR15 SLC2A11 GRIP2 SGEF
> [8546] PIK3IP1 RPS27 AQP7
> 8548 Levels: 3.8-1 A2M A4GALT A4GNT AAAS AAK1 AAMP AANAT AARSD1 AASS
> ... hCG_1730474
>
> What's the meaning of the last line? Is it an error?
>

Why should this be an error? I found hCG_173047 in your data set. For problem like this, try to locate the culprit be reducing the data set: first take the first half, then, if no error, the second, recursively. And please, don't post these huge sets again before having reduced the problem to the minimum.

Dieter



R-help_at_r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Received on Thu 29 May 2008 - 16:55:16 GMT

Archive maintained by Robert King, hosted by the discipline of statistics at the University of Newcastle, Australia.
Archive generated by hypermail 2.2.0, at Thu 29 May 2008 - 17:30:45 GMT.

Mailing list information is available at https://stat.ethz.ch/mailman/listinfo/r-help. Please read the posting guide before posting to the list.

list of date sections of archive