Re: [R] compiling pnmath on an intel processor running mac OS 10.5

From: Luke Tierney <luke_at_stat.uiowa.edu>
Date: Thu, 10 Jul 2008 14:04:27 -0500 (CDT)

You need a gcc version that supports OpenMP; I believe that means gcc 4.2 or later.

pnmath0 should work with older gcc versions.

luke

On Thu, 10 Jul 2008, Mike Lawrence wrote:

> Has anyone successfully compiled pnmath
> (http://www.stat.uiowa.edu/~luke/R/experimental) for an intel processor
> running mac OS 10.5? When I attempt to do so via the R package installer
> (choosing "Local Source Package" and pointing to the pnmath_0.0-2.tar.gz
> file), I get the following errors:
>
> * Installing *source* package 'pnmath' ...
> ** libs
> ** arch - i386
> gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk
> -mmacosx-version-min=10.4 -std=gnu99
> -I/Library/Frameworks/R.framework/Resources/include
> -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -fopenmp
> -fPIC -g -O2 -march=nocona -c bd0.c -o bd0.o
> cc1: error: unrecognized command line option "-fopenmp"
> make: *** [bd0.o] Error 1
> ** arch - ppc
> chmod: /Library/Frameworks/R.framework/Resources/library/pnmath/libs/i386/*:
> No such file or directory
> gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk
> -mmacosx-version-min=10.4 -std=gnu99
> -I/Library/Frameworks/R.framework/Resources/include
> -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include
> -fopenmp -fPIC -g -O2 -c bd0.c -o bd0.o
> cc1: error: unrecognized command line option "-fopenmp"
> make: *** [bd0.o] Error 1
> chmod: /Library/Frameworks/R.framework/Resources/library/pnmath/libs/ppc/*:
> No such file or directory
> ERROR: compilation failed for package 'pnmath'
> ** Removing '/Library/Frameworks/R.framework/Resources/library/pnmath'
>
>
>
> --
> Mike Lawrence
> Graduate Student, Department of Psychology, Dalhousie University
>
> www.memetic.ca
>
> "The road to wisdom? Well, it's plain and simple to express:
> Err and err and err again, but less and less and less."
> - Piet Hein
>
> ______________________________________________
> R-help_at_r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

-- 
Luke Tierney
Chair, Statistics and Actuarial Science
Ralph E. Wareham Professor of Mathematical Sciences
University of Iowa                  Phone:             319-335-3386
Department of Statistics and        Fax:               319-335-3017
    Actuarial Science
241 Schaeffer Hall                  email:      luke_at_stat.uiowa.edu
Iowa City, IA 52242                 WWW:  http://www.stat.uiowa.edu

______________________________________________
R-help_at_r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Received on Thu 10 Jul 2008 - 19:19:51 GMT

Archive maintained by Robert King, hosted by the discipline of statistics at the University of Newcastle, Australia.
Archive generated by hypermail 2.2.0, at Thu 10 Jul 2008 - 19:32:10 GMT.

Mailing list information is available at https://stat.ethz.ch/mailman/listinfo/r-help. Please read the posting guide before posting to the list.

list of date sections of archive