[R] error with the function GOHyperG from GOstats package

From: Sabrina Carpentier <sabrina.carpentier_at_curie.fr>
Date: Thu 05 May 2005 - 00:00:08 EST


I am running R 2.0.0, GOstats 1.1.1 and GO 1.7.0,

and when I use the function GOHyperG, I have the following error:

w1<-as.list(hgu95av2LOCUSID)

w2<-unique(unlist(w1))

set.seed(123)
myLL<-sample(w2,100)

xx <- GOHyperG(myLL)
Error in mget(x, env = GOTERM, ifnotfound = NA) : recursive default argument reference

In fact first I tried this function with my locusId ' list (with affymetrix hgu133plus2), but I had the same error...

Any help is appreciated

Regards,
Sabrina

Sabrina Carpentier
Service Bioinformatique
Institut Curie - Bat. Trouillet Rossignol (4e étage) 26 rue d'Ulm - 75248 Paris Cedex 5 - FRANCE Tel : +33 1 42 34 65 21

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