[R] lme help

From: Mahdi Osman <m_osm_at_gmx.net>
Date: Wed 08 Feb 2006 - 20:42:43 EST


Hi list,

I am fitting microarray data (intensity) model using the lme package in R environment. I have 5 fixed variables in the model. One of the fixed variables is genes. I am trying to get p-values for different genes. But I am getting only one p-value for all genes together. I can get a list of p-value when I run lm. Why can't this work in lme?

My aim is to do multiple comaprison of all the genes that I have and I can only do this if I have a list of their p-vales

I was wondering if you can help me solve this problem. That is getting a list of p-value for each gene in the model using the lme.

Thanks in advance for your help

Regards

Mahdi

-- 
-----------------------------------
Mahdi Osman (PhD)
E-mail: m_osm@gmx.net

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Received on Wed Feb 08 20:50:13 2006

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