Re: [R] lme help

From: Adaikalavan Ramasamy <ramasamy_at_cancer.org.uk>
Date: Wed 08 Feb 2006 - 23:16:48 EST

Please read the posting
1) I think BioConductor mailing list might be better as some of these could be implemented via LIMMA (I believe) 2) Provide sufficient information and perhaps a simple example.

Regards, Adai

On Wed, 2006-02-08 at 10:42 +0100, Mahdi Osman wrote:
> Hi list,
>
>
> I am fitting microarray data (intensity) model using the lme package in R
> environment. I have 5 fixed variables in the model. One of the fixed
> variables is genes. I am trying to get p-values for different genes. But I
> am getting only one p-value for all genes together. I can get a list of
> p-value when I run lm. Why can't this work in lme?
>
> My aim is to do multiple comaprison of all the genes that I have and I can
> only do this if I have a list of their p-vales
>
>
> I was wondering if you can help me solve this problem. That is getting
> a list of p-value for each gene in the model using the lme.
>
>
> Thanks in advance for your help
>
>
> Regards
>
>
>
> Mahdi
>



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https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html Received on Wed Feb 08 23:51:15 2006

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