[R] R2.2.1 source compile problem in MacOS10.3

From: Zhesi He <zh107_at_york.ac.uk>
Date: Mon 27 Feb 2006 - 01:58:10 EST


Dear R-list,

Realising the importance of updating the R base, I tried to compile the source file of R2.2.1 in my machine, but failed.

According to "R for Mac OS X FAQ", i've got the basic dependencies which are gcc 3.3 and g77 3.4.
  ./configure is fine
Here are the errors I got from make:

>make

...

gcc -I../../src/extra/zlib -I../../src/extra/bzip2 
-I../../src/extra/pcre  -no-cpp-precomp -I. -I../../src/include 
-I../../src/include -I/sw/include -I/usr/local/include -DHAVE_CONFIG_H  
  -g -O2 -c Rmain.c -o Rmain.o
gcc -mdynamic-no-pic -L/sw/lib -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR
ld: warning multiple definitions of symbol _signgam ../../lib/libR.dylib(lgamma.lo) definition of _signgam /usr/lib/libSystem.dylib(gamma9.o) definition of _signgam ld: /usr/lib/gcc/darwin/3.3/libgcc.a(_fixunsdfdi.o) illegal reference to symbol: ___floatdidf defined in indirectly referenced dynamic library /usr/local/lib/libgcc_s.1.0.dylib
make[3]: *** [R.bin] Error 1
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1

make: *** [R] Error 1

So... is it something wrong with my gcc?

I also have older version of R installed in my machine. R1.8 and R2.0. And I have linked executive files called R and R2.0 in /usr/local/bin/ and linked R and R2.0 directories each containing "library" directory in /usr/local/lib
Hope they are not affecting the installation of R2.2.1.

Any suggestion would help.
Thanks a lot.


Zhesi He
S-Block Biology, YCCSA, University of York York YO10 5YW, U.K.
Phone: +44-(0)1904-328554
Email: zh107@york.ac.uk


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